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Uganda/PPD_00D08M4.1/2022-10-22
S. Balinandi, S. Whitmer, S. Mulei, C. Nassuna, G. Pimundu, T. Muyigi, M. Kainulainen, E. Shedroff, I. Krapiunaya, F. Scholte, L. Nyakarahuka, A. Tumusiime, J. Kyondo, J. Baluku, J. Kiconco, J. R. Harris, A. R. Ario, A. Kagirita, H. K. Bosa, I. Ssewanyana, S. Nabadda, H. G. Mwebesa, J. R. Aceng, D. Atwine, ..., J. Klena

Centers for Disease Control and Prevention, Viral Special Pathogens Branch

Sample details

Collection date
2022-10-22
Sampling location
Uganda
Isolate name
Ebolavirus/H.sapiens-wt/Uganda/2022/2022003012_C102

Data use terms

Data use terms
OPEN

INSDC

INSDC accession
NCBI release date
2023-08-08
NCBI update date
2024-09-09

Submission details

Submission ID
OQ673069.1
Date submitted
2026-04-15 08:06:41 UTC
Date released
2026-04-15 08:12:04 UTC
Earliest release date
2023-08-08

Alignment and QC

Length
18490 (94.8%)
# of SNPs
134
# of ambiguous bases
14
# of unknown bases
586

Nucleotide mutations

Mutations called relative to the NC_006432.1 reference

Substitutions

  • A309G
  • A314G
  • A496G
  • G575A
  • T718C
  • G982A
  • T1063C
  • A1537C
  • C1646T
  • A1669G
  • T1816G
  • C1837T
  • A1978G
  • G1984A
  • C2094T
  • C2194T
  • A2293G
  • G2390A
Deletions
N/A
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_006432.1 reference

Substitutions

GP

  • GP:G3S
  • GP:P250T
  • GP:Q251H
  • GP:F252L
  • GP:S408N

L

  • L:K43R
  • L:K651N
  • L:I954V
  • L:D1383E
  • L:S1585P
  • L:V1600I
  • L:N1822D
  • L:P1877S
  • L:L2041P

NP

  • NP:V40I
  • NP:S546L
  • NP:G645R
  • NP:R711C
  • NP:L721F

VP30

  • VP30:V71I

VP35

  • VP35:N153S
  • VP35:I190T

VP40

  • VP40:R2K

sGP

  • sGP:G3S
  • sGP:P250T
  • sGP:Q251H
  • sGP:F252L

ssGP

  • ssGP:G3S
  • ssGP:P250T
  • ssGP:Q251H
  • ssGP:F252L
Deletions
N/A
Insertions
N/A

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