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PPD_00D011J.1

USA/PPD_00D011J.1/2013
A. Marzi, L. Banadyga, E. Haddock, T. Thomas, K. Shen, E. J. Horne, D. P. Scott, H. Feldmann, H. Ebihara, E. Dahlstrom, S. Anzick, S. Ricklefs & S. Porcella

Rocky Mountain Laboratories, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Laboratory of Virology

Sample details

Collection date
2013
Sampling location
USA
Isolate name
Marburg virus/RML-IRF/M.auratus-lab/AGO/2005/Angola-368-HA

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-04-15 08:06insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
MARV.A.3

INSDC

INSDC accession
NCBI release date
2016-12-28
NCBI update date
2016-12-28

Host

Host

Submission details

Submission ID
KY047764.1
Submitting group
Date submitted
2026-04-15 08:06:18 UTC
Date released
2026-04-15 08:10:04 UTC
Earliest release date
2016-12-28

Alignment and QC

Length
19025 (99.5%)
# of SNPs
1354
# of inserted bases
3

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions

  • A90T
  • T91A
  • A92T
  • T93C
  • C115T
  • G124A
  • G127A
  • C142T
  • C148T
  • A169G
  • T181C
  • C256T
  • G289A
  • T292C
  • T304C
  • T307C
  • G310A
  • G337A
Deletions
N/A
Insertions

ins_18681:G, ins_18872:G, ins_19111:A

Amino acid substitutions

Substitutions called relative to the NC_001608.3 reference

Substitutions

GP

  • GP:F6L
  • GP:T16V
  • GP:N18T
  • GP:N28I
  • GP:T74A
  • GP:A214T
  • GP:I231K
  • GP:P233L
  • GP:R239H
  • GP:I242V
  • GP:P248S
  • GP:S260N
  • GP:A267T
  • GP:R276Q
  • GP:H279Y
  • GP:V285A
  • GP:D317G
  • GP:A318V

L

  • L:D124N
  • L:S128P
  • L:A129T
  • L:I214V
  • L:H335C
  • L:D336C
  • L:V359I
  • L:E536D
  • L:I757V
  • L:S957A
  • L:K981R
  • L:E1143K
  • L:S1163A
  • L:K1164E
  • L:L1169F
  • L:E1180G
  • L:A1364S
  • L:N1374S

NP

  • NP:M428I
  • NP:D440S
  • NP:G481S
  • NP:L500I
  • NP:N501D
  • NP:P514L
  • NP:Q518P
  • NP:A577V
  • NP:N578S
  • NP:P579S
  • NP:M612A
  • NP:D625Y

VP24

  • VP24:A12V
  • VP24:N17K

VP30

  • VP30:V15A
  • VP30:T18S
  • VP30:Y34H
  • VP30:A88T
  • VP30:M201I

VP35

  • VP35:A27T
  • VP35:L33P
  • VP35:I67V
  • VP35:K69R
  • VP35:R70K
  • VP35:M180T

VP40

  • VP40:G106D
  • VP40:D184N
  • VP40:I197V
Deletions
N/A
Insertions
N/A

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