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PPD_00CWTAG.1

USA/PPD_00CWTAG.1/2026-02-04
H. D. Kunerth, M. Plumb, D. Evans, L. Bohnker-Voels, K. Pung, B. Weber, J. Garfin, A. Mondelli, J. Jencks, M. Anacker & S. Namugenyi

Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab

Sample details

Collection date
2026-02-04
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVB-03810

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-25 03:35insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B.D.E.1.2

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-24
NCBI update date
2026-03-24
Raw reads accession

Host

Host

Submission details

Submission ID
PZ154731.1
Submitting group
Date submitted
2026-03-25 03:35:46 UTC
Date released
2026-03-25 03:44:43 UTC
Earliest release date
2026-03-24

Alignment and QC

Length
15140 (95.6%)
# of SNPs
153
# of inserted bases
4
# of deleted bases
2
# of unknown bases
585

Nucleotide mutations

Mutations called relative to the OP975389.1 reference

Substitutions

  • G513T
  • G579A
  • C583T
  • G599A
  • C829T
  • A1027G
  • G1028A
  • A1132G
  • G1385A
  • G1417A
  • A1507G
  • G1732A
  • T1742C
  • G1768A
  • T1846C
  • C2074T
  • C2198T
  • C2554T
Deletions

973, 4586
Insertions

ins_15092:ATAT

Amino acid substitutions

Substitutions called relative to the OP975389.1 reference

Substitutions

F

  • F:F12I
  • F:S190N
  • F:S211N
  • F:S389P

G

  • G:A74V
  • G:I87T
  • G:S100G
  • G:A116T
  • G:T131A
  • G:I137T
  • G:P214S
  • G:L217P
  • G:P221L
  • G:I252T
  • G:T254I
  • G:I268T
  • G:A269V
  • G:S275P
  • G:K276E
  • G:Y285H
  • G:A301T
  • G:S307P
  • G:*311Q

L

  • L:S169P
  • L:K570R
  • L:G1250S
  • L:I1751V
  • L:R1759K
  • L:T1987I

M2-1

  • M2-1:S174G

M2-2

  • M2-2:I2T
  • M2-2:S24N
  • M2-2:M27T
  • M2-2:D35N
  • M2-2:C49F

N

  • N:V97I
  • N:Y216H

NS2

  • NS2:D6N
Deletions
N/A
Insertions
N/A

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