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PPD_00CWB1G.1
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Download FASTA
Download metadata TSV
USA/PPD_00CWB1G.1/2026-02-09
H. D. Kunerth,
M. Plumb,
D. Evans,
L. Bohnker-Voels,
K. Pung,
B. Weber,
J. Garfin,
A. Mondelli,
J. Jencks,
M. Anacker &
S. Namugenyi
Minnesota Department of Health, Public Health Laboratory - Infectious Disease Lab
Sample details
Collection date
2026-02-09
Sampling location
USA (Minnesota)
Isolate name
MN-MDH-RSVA-03584
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-19 03:49
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Lineage
Lineage
A.D.1.5
INSDC
INSDC accession
PZ136008.1
BioProject accession
PRJNA1048457
BioSample accession
SAMN56373921
NCBI release date
2026-03-18
NCBI update date
2026-03-18
Raw reads accession
SRR37517679
Host
Host
Homo sapiens
Submission details
Submission ID
PZ136008.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-19 03:48:56 UTC
Date released
2026-03-19 03:58:33 UTC
Earliest release date
2026-03-18
Alignment and QC
Length
15047 (92.5%)
# of SNPs
242
# of inserted bases
4
# of deleted bases
4
# of unknown bases
964
Nucleotide mutations
Mutations called relative to the
PP109421.1
reference
Substitutions
C
90
T
C
183
T
G
198
A
G
240
A
A
321
G
A
351
G
A
496
C
G
551
A
C
589
T
C
622
T
G
664
A
T
697
C
A
748
G
T
1032
C
T
1048
C
G
1049
A
G
1050
A
G
1074
A
Show more
Deletions
3148, 4592, 7428, 7555
Insertions
ins_2299:G, ins_7586:A, ins_15115:TT
Amino acid substitutions
Substitutions called relative to the
PP109421.1
reference
Substitutions
F
F:
T
72
A
F:
V
127
I
F:
V
247
I
F:
K
470
R
G
G:
A
57
T
G:
P
71
L
G:
H
90
Y
G:
S
100
N
G:
L
101
F
G:
T
119
I
G:
I
134
K
G:
L
142
S
G:
G
224
V
G:
P
234
S
G:
S
243
I
G:
K
262
E
G:
I
265
L
G:
S
275
G
G:
D
284
G
G:
E
286
D
G:
S
294
P
G:
Y
304
H
G:
T
319
I
G:
T
320
A
L
L:
N
143
D
L:
P
171
L
L:
T
179
S
L:
N
209
S
L:
R
256
K
L:
S
560
T
L:
Y
598
H
L:
M
1225
I
L:
L
1438
Q
L:
I
1653
V
L:
K
1661
N
L:
N
1723
S
L:
E
1725
G
L:
G
1731
D
L:
T
1795
A
M
M:
M
43
I
M2-1
M2-1:
N
174
S
M2-1:
S
176
P
M2-1:
T
180
A
M2-2
M2-2:
Y
24
C
M2-2:
S
44
N
N
N:
V
352
A
P
P:
L
55
P
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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