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PPD_00CUTUH.1

DENV-3/India/FEB-0208/2025-01-06
H. Sivakumar, F. S. Philomenadin, N. Devanathan & R. Dhodapkar

JIPMER, Dept of Microbiology

Sample details

Collection date
2025-01-06
Sampling location
India (Puducherry)
Isolate name
FEB-0208

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-12 11:21insdc_ingest_userOPEN
Data use terms URL

INSDC

INSDC accession
NCBI release date
2025-10-21
NCBI update date
2025-10-21

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
PX460869.1
Submitting group
Date submitted
2026-03-12 11:19:33 UTC
Date released
2026-03-12 12:02:59 UTC
Earliest release date
2025-10-21

Lineage & Serotype

Lineage
3III_A
Serotype
DENV-3

Alignment and QC

Length
504 (48.2%)
# of SNPs
20
# of deleted bases
4652

Nucleotide mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

  • A131T
  • C203T
  • T235C
  • T250C
  • C256T
  • A265G
  • C289T
  • T295C
  • C334T
  • C358T
  • C383A
  • A416G
  • T436C
  • T496A
  • T556C
  • G565A
  • T567A
  • G568A
  • A616G
  • T619A
Deletions

628-5279
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_001475.2 reference

Substitutions

C

  • C:I13F
  • C:Q97K
  • C:I108V

prM

  • prM:T5S
  • prM:G7D
  • prM:H11R
  • prM:S15G
  • prM:Q17N
  • prM:S28A
  • prM:A29S
  • prM:V31I
  • prM:L44K
  • prM:E46D
  • prM:M49V
  • prM:R55H
  • prM:T59V
  • prM:D62E
Deletions
N/A
Insertions
N/A

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