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PPD_00CUNTQ.1
Download
Download FASTA
Download metadata TSV
DENV-4/USA/PPD_00CUNTQ.1/2025-06-26
M. Mitchell,
Y. Dong,
O. Tekin &
Y. Huang
FLDOH, BPHL
Sample details
Collection date
2025-06-26
Sampling location
USA (FL)
Isolate name
DENV-4/USA/FL-BPHL-0013/2025
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2026-03-12 11:21
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
INSDC
INSDC accession
PX395911.1
BioProject accession
PRJNA973096
BioSample accession
SAMN51637539
NCBI release date
2025-09-24
NCBI update date
2025-09-24
Raw reads accession
SRR35515456
Host
Host
9606
Host name - scientific
Homo sapiens
Submission details
Submission ID
PX395911.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2026-03-12 11:19:33 UTC
Date released
2026-03-12 12:02:59 UTC
Earliest release date
2025-09-24
Lineage & Serotype
Lineage
4II_B.2
Serotype
DENV-4
Alignment and QC
Length
10486 (98.5%)
# of SNPs
370
Nucleotide mutations
Mutations called relative to the
NC_002640.1
reference
Substitutions
G
77
A
C
87
T
A
224
G
G
335
A
G
356
A
A
362
T
C
414
T
C
431
T
T
444
C
C
445
A
C
447
T
C
449
G
A
450
T
G
451
C
C
452
A
A
488
G
G
497
A
T
551
C
Show more
Deletions
N/A
Insertions
N/A
Amino acid mutations
Mutations called relative to the
NC_002640.1
reference
Substitutions
E
E:
M
163
T
E:
E
172
G
E:
K
174
N
E:
Y
233
H
E:
I
351
V
NS1
NS1:
A
6
V
NS1:
E
127
G
NS1:
S
141
T
NS1:
S
152
F
NS1:
V
178
M
NS1:
I
287
V
NS2A
NS2A:
G
3
S
NS2A:
V
35
A
NS2A:
T
49
S
NS2A:
S
65
F
NS2A:
I
72
T
NS2A:
V
79
A
NS2A:
V
112
T
NS2A:
P
159
S
NS2A:
Q
188
H
NS2A:
V
192
I
NS2B
NS2B:
V
74
I
NS2B:
I
95
V
NS2B:
V
116
L
NS3
NS3:
K
14
Q
NS3:
K
213
R
NS3:
P
435
T
NS3:
E
558
K
NS4A
NS4A:
V
58
I
NS4A:
I
78
M
NS4A:
T
87
I
NS4A:
L
94
M
NS4B
NS4B:
F
13
L
NS4B:
T
56
A
NS5
NS5:
A
44
P
NS5:
R
246
K
NS5:
Q
548
K
NS5:
K
649
R
NS5:
V
653
I
NS5:
G
676
S
NS5:
T
826
V
NS5:
I
837
V
prM
prM:
T
4
S
prM:
G
7
D
prM:
H
11
L
prM:
S
15
A
prM:
Q
17
H
prM:
K
21
R
prM:
S
22
P
prM:
S
28
T
prM:
A
29
E
prM:
V
31
I
prM:
M
33
K
prM:
L
44
M
prM:
M
49
V
prM:
R
55
L
prM:
I
56
L
prM:
T
57
V
prM:
E
58
N
prM:
D
62
E
Show more
Deletions
N/A
Insertions
N/A
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
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