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PPD_00BFSJY.1

YFV/Nigeria/NIG_P11F_UIFARM/2022-10-11
A. V. Opayele, O. S. Ogunlusi, B. O. Motayo & A. O. Faneye

University of Ibadan, Virology

Sample details

Collection date
2022-10-11
Sampling location
Nigeria
Isolate name
NIG_P11F_UIFARM

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-12 10:57insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
Clade V

INSDC

INSDC accession
NCBI release date
2025-09-23
NCBI update date
2025-09-23

Host

Host
Host name - scientific
Culicidae

Submission details

Submission ID
PX315715.1
Submitting group
Date submitted
2026-03-12 10:57:28 UTC
Date released
2026-03-12 11:27:19 UTC
Earliest release date
2025-09-23

Alignment and QC

Length
182 (2.02%)
# of SNPs
26
# of deleted bases
37
# of frame shifts
1
Frame shifts
RdRPol:540-905(nt:9252-10351)

Nucleotide mutations

Mutations called relative to the NC_002031.1 reference

Substitutions

  • G9047A
  • A9049G
  • C9052T
  • G9054C
  • T9062C
  • G9070A
  • G9072C
  • T9075G
  • T9090A
  • G9098A
  • G9100A
  • C9102G
  • T9105C
  • A9109C
  • G9115C
  • C9124A
  • A9148C
  • G9160C
Deletions

9215-9251
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_002031.1 reference

Substitutions

RdRPol

  • RdRPol:G471R
  • RdRPol:R473P
  • RdRPol:W476R
  • RdRPol:M478I
  • RdRPol:W479S
  • RdRPol:L480R
  • RdRPol:L485H
  • RdRPol:E488K
  • RdRPol:A489G
  • RdRPol:L490P
  • RdRPol:D496E
  • RdRPol:L513I
  • RdRPol:V519E
  • RdRPol:R521T
  • RdRPol:D522N
Deletions

RdRPol

RdRPol:527-539
Insertions
N/A

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