This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

PPD_00BFR02.1

YFV/Brazil/C3354/2022-05-26
V. Bernardi, L. Sacchetto, A. Hendy, N. Fe, I. Teixeira, B. Marques, K. Hanley, M. P. G. Mourao, M. V. G. Lacerda, N. Vasilakis & M. L. Nogueira

Faculdade de Medicina de Sao Jose do Rio Preto, Departamento de Doencas Dermatologicas, Infecciosas e Parasitarias

Sample details

Collection date
2022-05-26
Sampling location
Brazil (Amazonas, Manaus)
Isolate name
C3354

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-12 10:57insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
Clade VI

INSDC

INSDC accession
NCBI release date
2024-09-15
NCBI update date
2024-09-15

Host

Host
Host name - scientific
Haemagogus

Submission details

Submission ID
PQ276812.1
Submitting group
Date submitted
2026-03-12 10:57:28 UTC
Date released
2026-03-12 11:27:19 UTC
Earliest release date
2024-09-15

Alignment and QC

Length
485 (4.47%)
# of SNPs
62

Nucleotide mutations

Mutations called relative to the NC_002031.1 reference

Substitutions

  • T2809C
  • G2812A
  • C2827T
  • G2833A
  • G2836A
  • A2863G
  • A2878G
  • C2881T
  • C2894A
  • G2896A
  • C2899G
  • T2908C
  • G2920A
  • G2932A
  • A2947C
  • C2950A
  • C2962T
  • C2980T
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_002031.1 reference

Substitutions

NS1

  • NS1:I177M
  • NS1:A218T
  • NS1:E240D
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue