This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.
YFV/Australia/PPD_00BF91G.1/2023-08
A. Aziz, I. Savic & L. Caly

Melbourne Health, VIDRL

Sample details

Collection date
2023-08
Sampling location
Australia (NSW)
Isolate name
yfv/NSW/1-17D/2023

Data use terms

Data use terms
OPEN

Clade

Clade
Clade V

INSDC

INSDC accession
NCBI release date
2023-11-08
NCBI update date
2023-11-08

Host

Host
Host name - scientific
Homo sapiens

Submission details

Submission ID
OR700702.1
Date submitted
2026-03-12 10:57:28 UTC
Date released
2026-03-12 11:17:02 UTC
Earliest release date
2023-11-08

Alignment and QC

Length
10861 (99.9%)
# of SNPs
8
# of ambiguous bases
5

Nucleotide mutations

Mutations called relative to the NC_002031.1 reference

Substitutions

  • T4054C
  • A5641G
  • C6529T
  • G6758A
  • G7319A
  • G9605A
  • A10243G
  • G10454A
Deletions
N/A
Insertions
N/A

Amino acid mutations

Mutations called relative to the NC_002031.1 reference

Substitutions

NS4a

  • NS4a:V107I

NS4b

  • NS4b:E145K

RdRPol

  • RdRPol:D657N
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue