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PPD_00BDCYN.1

Spain/PPD_00BDCYN.1/2026-01-26
C. Andres, A. Gonzalez Sanchez, I. Prats, K. Garcia Comunas, R. Vaz, M. C. Martin, N. Larrosa & A. Anton

Hospital Universitari Vall d' Hebron, Barcelona, Barcelona

Sample details

Collection date
2026-01-26
Sampling location
Spain (Catalonia)
Isolate name
hRSV/A/Spain/CT-HUVH-781282/2026

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-03-08 07:04insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D.5.2

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-03-07
NCBI update date
2026-03-08

Host

Host

Submission details

Submission ID
OZ416388.1
Submitting group
Date submitted
2026-03-08 07:04:23 UTC
Date released
2026-03-08 07:10:53 UTC
Earliest release date
2026-03-07

Alignment and QC

Length
15197 (99.8%)
# of SNPs
252
# of inserted bases
2
# of deleted bases
1
# of unknown bases
2
# of frame shifts
1
Frame shifts
G:258-322(nt:5423-5617)

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • A135T
  • C165T
  • C183T
  • T246C
  • C528T
  • T697C
  • T922C
  • A940C
  • T1004C
  • A1009G
  • A1021G
  • T1028C
  • G1050A
  • A1051C
  • A1078G
Deletions

7515
Insertions

ins_4592:A, ins_5422:A

Amino acid mutations

Mutations called relative to the PP109421.1 reference

Substitutions

F

  • F:A103T
  • F:T122A

G

  • G:A57V
  • G:P71L
  • G:H90Y
  • G:L101F
  • G:I134K
  • G:Q140R
  • G:I141V
  • G:P206Q
  • G:K209R
  • G:K212E
  • G:P215L
  • G:G224E
  • G:K233R
  • G:S243I
  • G:L248I

L

  • L:P171L
  • L:R256K
  • L:Y598H
  • L:L1438Q
  • L:N1723G
  • L:E1725G
  • L:G1731D
  • L:T1942I
  • L:V1943D

M

  • M:M73L

M2-1

  • M2-1:S176P

M2-2

  • M2-2:S44N

N

  • N:I104V
  • N:V352A

P

  • P:L55P
  • P:T69I
  • P:E239D
Deletions
N/A
Insertions
N/A

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