This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

PPD_00BCLXJ.1

Ireland/PPD_00BCLXJ.1/2026-01-08
M. Carr, C. Kenna, U. Morley, A. Crowley, C. Bennett, W. Banka, L. Fahey, A. Rice, J. Dean, D. Hare & C. F. De Gascun

UCD National Virus Reference Laboratory, Dublin, Co. Dublin

Sample details

Collection date
2026-01-08
Sampling location
Ireland
Isolate name
hRSV/A/Ireland/un-NVRL-GIRL00004114/2026

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-02-28 06:46insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
A.D.3.12

INSDC

INSDC accession
BioProject accession
BioSample accession
NCBI release date
2026-02-27
NCBI update date
2026-02-28

Host

Host

Submission details

Submission ID
OZ414558.1
Submitting group
Date submitted
2026-02-28 06:46:22 UTC
Date released
2026-02-28 06:55:22 UTC
Earliest release date
2026-02-27

Alignment and QC

Length
15163 (96%)
# of SNPs
217
# of inserted bases
1
# of unknown bases
552

Nucleotide mutations

Mutations called relative to the PP109421.1 reference

Substitutions

  • T66A
  • A67G
  • C90T
  • C183T
  • T353C
  • A357G
  • A563G
  • G587T
  • C686T
  • G1077A
  • T1209C
  • A1275G
  • T1287C
  • T1308C
  • A1341G
  • T1359C
  • G1368A
  • T1413A
Deletions
N/A
Insertions

ins_3154:A

Amino acid mutations

Mutations called relative to the PP109421.1 reference

Substitutions

F

  • F:T12I
  • F:S276N

G

  • G:P71L
  • G:H90Y
  • G:L101F
  • G:T113I
  • G:P126S
  • G:V131D
  • G:I134K
  • G:N178G
  • G:K221R
  • G:G224E
  • G:P230T
  • G:N242D
  • G:S243I
  • G:S250T
  • G:H258Q
  • G:K262E
  • G:I265L
  • G:H266L

L

  • L:P171L
  • L:A173S
  • L:R256K
  • L:Y598H
  • L:L835M
  • L:E1190D
  • L:L1438Q
  • L:N1723S
  • L:E1725G
  • L:G1731D
  • L:V2129I

M

  • M:K172R

M2-2

  • M2-2:Y24C
  • M2-2:S44N
  • M2-2:T77A

N

  • N:V352A

NS1

  • NS1:L95S

P

  • P:L55P
  • P:T72N
  • P:T92M

SH

  • SH:V49I
Deletions
N/A
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue