This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the example data repository. This instance should not be used for analysis.

PPD_00AQWGF.1

Display Name: Japan/PPD_00AQWGF.1/2025-04-28
K. Kuroki & R. Kumagai

Sample details

Collection date
2025-04-28
Country
Japan
Admin level 1
Tokyo
Isolate name
hMPV_B2/G/F25-202/Tokyo/2025

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-05 14:07insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
B2

Authors

Author affiliations
Department of Microbiology; 3-24-1 Hyakunin-cho, Shinjuku-ku, Tokyo 169-0073

INSDC

INSDC accession
NCBI release date
2025-07-04
NCBI update date
2025-07-05

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
772
Completeness
5.81%
# of SNPs
328
# of inserted bases
18
# of deleted bases
22
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
2
# of stop codons
0
Frame shifts
G:149-161(nt:6691-6729),G:207-224(nt:6864-6918)

Submission details

Submission ID
LC880211.1
Submitting group
Date submitted
2026-01-05 14:07:14 UTC
Date released
2026-01-05 14:46:25 UTC
Earliest release date
2025-07-04

Nucleotide mutations

Mutations called relative to the NC_039199.1 reference

Substitutions

  • C6339T
  • T6340A
  • T6342A
  • G6346A
  • C6351T
  • A6354T
  • A6358T
  • T6363A
  • A6364G
  • C6365T
  • G6369A
  • T6375G
  • C6378A
  • C6381T
  • A6385G
  • C6387T
  • A6389T
  • C6391T
    • Deletions
    6863, 6919, 6920, 6975-6984, 7009-7015, 7030, 7031
    Insertions
    ins_6690:A, ins_6699:AGCTAATCGGAGC, ins_6729:C, ins_7065:TT, ins_7080:T

    Amino acid mutations

    Mutations called relative to the NC_039199.1 reference

    Substitutions

    G

  • G:S32T
  • G:V34I
  • G:I38L
  • G:T40V
  • G:I43M
  • G:I47V
  • G:Y48F
  • G:N52D
  • G:K54A
  • G:M55K
  • G:Q56L
  • G:T59M
  • G:S60T
  • G:E61K
  • G:S62V
  • G:H64P
  • G:H65C
  • G:T66V
    • Deletions
    G:225, G:235
    Insertions
    ins_G:141:RQT, ins_G:187:AI

    Report an issue with this sequence or metadata

    Create GitHub issue