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PPD_00AHUV4.1

Display Name: Austria/PPD_00AHUV4.1/2024-09-13
D. M. Florian, S. W. Aberle & J. V. Camp

Sample details

Collection date
2024-09-13
Country
Austria
Isolate name
Austria/MUW1754593/2024

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2026-01-05 14:07insdc_ingest_userOPEN
Data use terms URL

Lineage

Lineage
2

Authors

Author affiliations
Medical University of Vienna, Center for Virology

INSDC

INSDC accession
NCBI release date
2025-01-08
NCBI update date
2025-01-08

Host

Host taxon ID
Host name - scientific
Homo sapiens

Alignment and QC metrics

Length
1465
Completeness
13.29%
# of SNPs
289
# of inserted bases
24
# of deleted bases
25
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
PQ785893.1
Submitting group
Date submitted
2026-01-05 14:06:31 UTC
Date released
2026-01-05 15:03:51 UTC
Earliest release date
2025-01-08

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions

  • C9123A
  • A9126G
  • T9129C
  • T9135C
  • C9144T
  • G9147A
  • T9150C
  • G9153C
  • T9156A
  • T9159C
  • T9180G
  • A9183T
  • A9186G
  • G9189A
  • T9204A
  • C9207T
  • G9210A
  • G9216A
    • Deletions
    10409-10411, 10417-10426, 10467-10470, 10487-10494
    Insertions
    ins_10448:G, ins_10458:CTTGAATTATGATTAATTA, ins_10483:GTT, ins_10501:T

    Amino acid mutations

    Mutations called relative to the NC_009942.1 reference

    Substitutions

    NS5

  • NS5:R522K
  • NS5:R527K
  • NS5:R546K
  • NS5:A569S
  • NS5:R590K
  • NS5:E638G
  • NS5:T641G
  • NS5:K644E
  • NS5:D676N
  • NS5:V740I
  • NS5:G805K
  • NS5:E816A
  • NS5:K837R
  • NS5:A860T
  • NS5:Q869H
  • NS5:A877S
  • NS5:I878V
  • NS5:D881E
    • Deletions
    None
    Insertions
    None

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