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PPD_0073Q0X.1

Display Name: Guinea/PPD_0073Q0X.1/2022-07-05
M. T. Makenov, S. Boumbaly, F. R. Tolno, N. Sacko, L. T. N'Fatoma, O. Mansare, B. Kolie, O. A. Stukolova, E. S. Morozkin, I. S. Kholodilov, O. B. Zhurenkova, M. V. Fyodorova, V. G. Akimkin, A. Y. Popova, N. Conde, M. Y. Boiro & L. S. Karan

Sample details

Collection date
2022-07-05
Country
Guinea
Isolate name
ERB-452

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-01 12:41insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
MARV.A.3

Authors

Author affiliations
Central Research Institute of Epidemiology, Research Group of Vector-borne and Zoonotic Diseases

INSDC

INSDC accession
NCBI release date
2023-03-11
NCBI update date
2023-06-15

Host

Host taxon ID
Host name - scientific
Rousettus aegyptiacus

Alignment and QC metrics

Length
1792
Completeness
4.79%
# of SNPs
58
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
876
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
OP716850.1
Submitting group
Date submitted
2025-12-01 12:41:47 UTC
Date released
2025-12-01 12:44:29 UTC
Earliest release date
2023-03-11

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions

  • T748C
  • C787T
  • T847C
  • A868G
  • T874C
  • C908T
  • T919C
  • G922A
  • A925G
  • C928T
  • C947T
  • C970T
  • C985T
  • G1018A
  • C1030T
  • T1057C
  • A1075G
  • G1087A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001608.3 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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