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PPD_0073NSE.1

Display Name: Zambia/PPD_0073NSE.1/2018-09-03
M. Kajihara, B. M. Hang'ombe, K. Changula, H. Harima, M. Isono, K. Okuya, R. Yoshida, A. Mori-Kajihara, Y. Eto, Y. Orba, H. Ogawa, Y. Qiu, H. Sawa, E. Simulundu, D. Mwizabi, M. Munyeme, D. Squarre, V. Mukonka, A. Mweene & A. Takada

Sample details

Collection date
2018-09-03
Country
Zambia

Data use terms

Data use terms
OPEN

Data use terms history

ChangedUserData use terms
2025-12-01 12:41insdc_ingest_userOPEN
Data use terms URL

Clade

Clade
MARV.B

Authors

Author affiliations
Research Center for Zoonosis Control; Kita 20, Nishi 10, Kita-ku, Sapporo, Hokkaido 0010020

INSDC

INSDC accession
NCBI release date
2019-08-23
NCBI update date
2023-06-17

Host

Host taxon ID
Host name - scientific
Rousettus aegyptiacus

Alignment and QC metrics

Length
464
Completeness
2.43%
# of SNPs
15
# of inserted bases
0
# of deleted bases
0
# of ambiguous bases
0
# of unknown bases
0
# of frame shifts
0
# of stop codons
0

Submission details

Submission ID
LC465158.1
Submitting group
Date submitted
2025-12-01 12:41:47 UTC
Date released
2025-12-01 12:44:29 UTC
Earliest release date
2019-08-23

Nucleotide mutations

Mutations called relative to the NC_001608.3 reference

Substitutions

  • T745C
  • C787T
  • C859T
  • G922A
  • T953C
  • A976G
  • T997C
  • T1036C
  • T1057C
  • A1075G
  • G1099A
  • A1102G
  • G1153A
  • A1183G
  • G1195A
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001608.3 reference

    Substitutions
    Deletions
    None
    Insertions
    None

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