This is a demo instance. You can upload any data you like, including test data to try things out. You can find test data to upload in the
example data
repository. This instance should not be used for analysis.
X
Pathoplexus
Organisms
Marburg Virus
SeqSets
News
About
Docs
Login
Pathoplexus
Organisms
Crimean-Congo Hemorrhagic Fever Virus
Ebola Sudan
Ebola Zaire
HMPV
Marburg Virus
Measles Virus
Mpox Virus
RSV-A
RSV-B
West Nile Virus
SeqSets
News
About
Docs
Login
API docs
Governance
Funding
Contact
Status
Marburg Virus
|
Browse data
Submit sequences
Tools
Select organism section
Browse data
Submit sequences
Tools
PPD_0073NAD.1
Download
Download FASTA
Download metadata TSV
Display Name: Canada/PPD_0073NAD.1/2014-01-15
X. Qiu,
G. Wong,
J. Audet,
T. Cutts,
Y. Niu,
S. Booth &
G. P. Kobinger
Sample details
Collection date
2014-01-15
Country
Canada
Isolate name
NML/M.musculus-lab/AGO/2005/Ang-MA-P2
Data use terms
Data use terms
OPEN
✕
Data use terms history
Changed
User
Data use terms
2025-12-01 12:41
insdc_ingest_user
OPEN
Close
(history)
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data
Clade
Clade
MARV.A.3
Authors
Author affiliations
Public Health Agency of Canada, Special Pathogens
INSDC
INSDC accession
KM261523.1
NCBI release date
2014-08-30
NCBI update date
2014-11-13
Alignment and QC metrics
Length
19114
Completeness
99.97%
# of SNPs
1342
# of inserted bases
3
# of deleted bases
0
# of ambiguous bases
5
# of unknown bases
0
# of frame shifts
0
# of stop codons
0
Submission details
Submission ID
KM261523.1
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2025-12-01 12:41:47 UTC
Date released
2025-12-01 12:44:29 UTC
Earliest release date
2014-08-30
Nucleotide mutations
Mutations called relative to the
NC_001608.3
reference
Substitutions
C
115
T
G
124
A
G
127
A
C
142
T
C
148
T
A
169
G
T
181
C
C
256
T
G
289
A
T
292
C
T
304
C
T
307
C
G
310
A
G
337
A
G
340
A
A
346
G
C
358
T
T
412
C
Show more
Deletions
None
Insertions
ins_18681:G, ins_18872:G, ins_19111:A
Amino acid mutations
Mutations called relative to the
NC_001608.3
reference
Substitutions
GP
GP:
F
6
L
GP:
T
16
V
GP:
N
18
T
GP:
N
28
I
GP:
T
74
A
GP:
A
214
T
GP:
I
231
K
GP:
P
233
L
GP:
R
239
H
GP:
I
242
V
GP:
P
248
S
GP:
S
260
N
GP:
A
267
T
GP:
R
276
Q
GP:
H
279
Y
GP:
V
285
A
GP:
D
317
G
GP:
A
318
V
Show more
L
L:
D
124
N
L:
S
128
P
L:
A
129
T
L:
I
214
V
L:
H
335
C
L:
D
336
C
L:
V
359
I
L:
E
536
D
L:
I
757
V
L:
S
957
A
L:
K
981
R
L:
E
1143
K
L:
S
1163
A
L:
K
1164
E
L:
L
1169
F
L:
E
1180
G
L:
A
1364
S
L:
N
1374
S
Show more
NP
NP:
M
428
I
NP:
D
440
S
NP:
G
481
S
NP:
L
500
I
NP:
N
501
D
NP:
P
514
L
NP:
Q
518
P
NP:
A
577
V
NP:
N
578
S
NP:
P
579
S
NP:
M
612
A
NP:
D
625
Y
VP24
VP24:
A
12
V
VP24:
N
17
K
VP24:
V
157
M
VP30
VP30:
V
15
A
VP30:
T
18
S
VP30:
Y
34
H
VP30:
A
88
T
VP30:
N
103
D
VP30:
M
201
I
VP35
VP35:
A
27
T
VP35:
L
30
S
VP35:
Y
34
H
VP35:
I
67
V
VP35:
K
69
R
VP35:
R
70
K
VP35:
M
180
T
VP35:
G
322
S
VP40
VP40:
L
27
S
VP40:
L
33
P
VP40:
N
42
H
VP40:
L
47
S
VP40:
G
79
S
VP40:
D
184
N
VP40:
I
197
V
Deletions
None
Insertions
None
Nucleotide sequence
Aligned nucleotide sequence
Aligned amino acid sequences
Report an issue with this sequence or metadata
Create GitHub issue