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Display Name: USA/PPD_006R36W.1/2025-07-01
E. Young

Submission details

Submission ID
PX121936.1
Date submitted
2025-08-27 16:37:32 UTC
Date released
2025-08-27 16:50:55 UTC

Data use terms

Data use terms
OPEN

Authors

Author affiliations
Utah Public Health Laboratory, Department of Health

Alignment and QC metrics

Completeness
82.24%
Length
15471
Total ambiguous nucs
0
Total deleted nucs
0
Total frame shifts
0
Total inserted nucs
0
Total SNPs
428
Total unknown nucs
2399

Sample details

Earliest release date
2025-08-20
Collection subdivision level 1
Utah
Collection country
USA
Collection date
2025-07-01
Collection date (lower bound)
2025-07-01
Collection date (upper bound)
2025-07-01
Isolate name
MVs/Utah.USA/27.25[D8]

Genotype

Genotype
D8

Host

Host name - scientific
Homo sapiens
Host taxon ID

INSDC

INSDC accession
NCBI release date
2025-08-20
NCBI update date
2025-08-20

Nucleotide mutations

Mutations called relative to the NC_001498.1 reference

Substitutions

  • A413G
  • T422C
  • T449C
  • C518T
  • C538T
  • T572C
  • C596T
  • G626A
  • C629T
  • A747C
  • T791C
  • G809C
  • T860C
  • T881C
  • C1043T
  • A1055G
  • G1076A
  • C1101T
  • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Mutations called relative to the NC_001498.1 reference

    Substitutions

    C

  • C:G181V
  • F

  • F:A9V
  • F:F11V
  • F:S276A
  • F:H419R
  • H

  • H:R175K
  • H:G235E
  • H:G243E
  • H:A267I
  • H:R334Q
  • H:N390I
  • H:A400T
  • H:V412L
  • H:N416D
  • H:T446S
  • H:V451M
  • H:K575Q
  • H:V608A
  • L

  • L:P43S
  • L:A81T
  • L:R142K
  • L:A252T
  • L:P275S
  • L:F321C
  • L:E329D
  • L:L610S
  • L:Y613H
  • L:R623K
  • L:E628K
  • L:V632I
  • L:N641D
  • L:I650M
  • L:T652A
  • L:D1037G
  • L:R1044G
  • L:V1343I
  • N

  • N:S144F
  • N:K214Q
  • N:I406T
  • N:K441R
  • N:G443S
  • N:E446G
  • N:Y451N
  • N:S457I
  • N:A459L
  • N:P467L
  • N:M471T
  • N:R497K
  • N:G509S
  • P

  • P:K195R
  • P:S219G
  • P:A269V
  • P:G270E
  • P:I282T
  • P:K350R
  • P:R355K
  • P:V414A
  • P:V446M
  • P:A459V
  • V

  • V:K195R
  • V:S219G
  • V:G237S
  • Deletions
    None
    Insertions
    None

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