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PPD_00396TL.1

Display Name: Kazakhstan/PPD_00396TL.1/2021-05-14
Sultankulova, K. T.; Shynybekova, G. O.; Kozhabergenov, N. S.; Mukhami, N. N.; Chervyakova, O. V.; Burashev, Y. D.; Zakarya, K. D.; Nakhanov, A. K.; Barakbayev, K. B.; Orynbayev, M. B.

Submission details

Submission ID
ON783804.1.S
Submitting group
Automated Ingest from INSDC/NCBI Virus by Loculus
Date submitted
2024-11-19 16:17:00 UTC
Date released
2024-11-19 16:28:16 UTC

Data use terms

Data use terms
OPEN

Data Use Terms History

ChangedUserData Use Terms
2024-11-19 16:17insdc_ingest_userOPEN
Data use terms URL
https://pathoplexus.org/about/terms-of-use/open-data

Authors

Author affiliations
Research Institute for Biological Safety Problems, Molecular Biology and Genetic Engineering

Alignment states and QC metrics S

Completeness S
26.61%
Length S
445
Total ambiguous nucs S
0
Total deleted nucs S
0
Total frame shifts S
0
Total inserted nucs S
0
Total SNPs S
62
Total unknown nucs S
0

Sample details

Collection subdivision level 1
Zhalagash
Collection country
Kazakhstan
Collection date
2021-05-14

INSDC

INSDC accession S
ON783804.1
NCBI release date
2022-10-19

Nucleotide mutations

Substitutions

S

  • S:C178A
  • S:T182C
  • S:C187T
  • S:G190A
  • S:G196A
  • S:T199C
  • S:C217T
  • S:G229A
  • S:C235T
  • S:T250A
  • S:G256A
  • S:G262A
  • S:A268C
  • S:G271A
  • S:T274C
  • S:T277C
  • S:T289C
  • S:C295T
    • Deletions
    None
    Insertions
    None

    Amino acid mutations

    Substitutions

    NP

  • NP:D116E
  • NP:P118T
  • NP:T124A
  • NP:N150H
    • Deletions
    None
    Insertions
    None